EnhancerDB
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  3. rs71642225[chr1:28494704]
Enhancers that have rs71642225[chr1:28494704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28493545 28502817 enh184
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
Transcript factors that have rs71642225[chr1:28494704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28494614 28495616 ZNF274 GTRD no Bone Marrow (K562) 21325308
chr1 28494614 28495616 ZNF274 GTRD no Bone Marrow (K562) 107802652
chr1 28494701 28494719 MAFF JASPAR yes 27749056
chr1 28494703 28494714 NRL JASPAR yes 27749057
chr1 28494703 28494718 MAFK JASPAR yes 27749058
Genes associated with rs71642225[chr1:28494704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 29063133 29096287 + YTHDF2 ENSG00000198492.10 29063133 568429 Liver 0.224548 418