EnhancerDB
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  3. rs71729911[chr16:12713688]
Enhancers that have rs71729911[chr16:12713688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 12701825 12716282 enh16559
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Placenta Thyroid Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr16 12713340 12713716 vista21932
VISTA
Transcript factors that have rs71729911[chr16:12713688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 12713673 12713688 SCRT1 JASPAR yes 9594945
chr16 12713673 12713688 SCRT1 JASPAR yes 49345023
chr16 12713682 12713700 NR3C1 JASPAR yes 9594946
chr16 12713682 12713700 NR3C1 JASPAR yes 49345024
chr16 12713683 12713704 IRF1 JASPAR yes 9594947
chr16 12713683 12713704 IRF1 JASPAR yes 49345025
chr16 12713685 12713700 STAT2 JASPAR yes 9594948
chr16 12713685 12713700 STAT2 JASPAR yes 49345026
chr16 12713686 12713707 IRF1 JASPAR yes 9594949
chr16 12713686 12713707 IRF1 JASPAR yes 49345027
chr16 12713687 12713708 IRF1 JASPAR yes 9594950
chr16 12713687 12713708 IRF1 JASPAR yes 49345028
chr16 12713688 12713703 FOXP1 JASPAR yes 9594951
chr16 12713688 12713703 FOXP1 JASPAR yes 49345029
chr16 12713688 12713709 IRF1 JASPAR yes 9594952
chr16 12713688 12713709 IRF1 JASPAR yes 49345030
Genes associated with rs71729911[chr16:12713688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More