EnhancerDB
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  3. rs71782228[chr1:165828415]
Enhancers that have rs71782228[chr1:165828415]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71782228[chr1:165828415]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165828402 165828422 RREB1 JASPAR yes 32804825
chr1 165828415 165828427 ZBTB7B JASPAR yes 32804826
chr1 165828415 165828427 ZBTB7C JASPAR yes 32804827
Genes associated with rs71782228[chr1:165828415], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 165796768 165880855 + UCK2 ENSG00000143179.8 165796768 0 Esophagus 0.350939 1520
chr1 165370159 165414433 - RXRG ENSG00000143171.8 165414433 413982 Heart 0.147392 1515