EnhancerDB
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  3. rs71819499[chr1:42416005]
Enhancers that have rs71819499[chr1:42416005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs71819499[chr1:42416005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42415985 42416006 IRF1 JASPAR yes 28440890
chr1 42415987 42416007 RREB1 JASPAR yes 28440891
chr1 42415990 42416005 FOXP1 JASPAR yes 28440893
chr1 42415992 42416012 RREB1 JASPAR yes 28440894
chr1 42415994 42416009 FOXP1 JASPAR yes 28440895
chr1 42415995 42416006 FOXA1 JASPAR yes 28440896
chr1 42415995 42416010 FOXA1 JASPAR yes 28440897
chr1 42415996 42416008 FOXC2 JASPAR yes 28440898
chr1 42415996 42416016 RREB1 JASPAR yes 28440899
chr1 42415997 42416009 FOXI1 JASPAR yes 28440900
chr1 42415997 42416017 RREB1 JASPAR yes 28440901
Genes associated with rs71819499[chr1:42416005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More