EnhancerDB
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  3. rs7220420[chr17:26216397]
Enhancers that have rs7220420[chr17:26216397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 26212045 26218395 enh17068
Thyroid Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs7220420[chr17:26216397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 26215971 26216461 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21748232
chr17 26215971 26216461 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245889
chr17 26215972 26216492 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21748233
chr17 26215972 26216492 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245890
chr17 26216024 26216540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245892
chr17 26216027 26216467 TEAD4 UCSC Txn Factor no Conserved 108245893
chr17 26216027 26216467 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108245894
chr17 26216049 26216445 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245895
chr17 26216064 26216400 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21748236
chr17 26216064 26216400 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245897
chr17 26216087 26216447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245899
chr17 26216097 26216441 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21748239
chr17 26216097 26216441 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245901
chr17 26216098 26216434 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108245902
chr17 26216112 26216436 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21748240
chr17 26216112 26216436 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245903
chr17 26216119 26216409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245904
chr17 26216140 26216416 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21748243
chr17 26216140 26216416 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245908
chr17 26216149 26216453 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21748244
chr17 26216149 26216453 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245909
chr17 26216388 26216399 CEBPA JASPAR yes 53656567
chr17 26216388 26216400 HLF JASPAR yes 53656568
chr17 26216389 26216399 CEBPB JASPAR yes 53656569
chr17 26216389 26216399 CEBPD JASPAR yes 53656570
chr17 26216389 26216399 CEBPE JASPAR yes 53656571
chr17 26216389 26216399 CEBPG JASPAR yes 53656572
chr17 26216389 26216400 CEBPB JASPAR yes 53656573
Genes associated with rs7220420[chr17:26216397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 26205340 26221778 - LYRM9 ENSG00000232859.5 26221778 0 Esophagus 1.03651e-09 15559
chr17 26205340 26221778 - LYRM9 ENSG00000232859.5 26221778 0 Esophagus 3.91155e-22 15559
chr17 26205340 26221778 - LYRM9 ENSG00000232859.5 26221778 0 Heart 7.48471e-10 15559
chr17 26205340 26221778 - LYRM9 ENSG00000232859.5 26221778 0 Spleen 5.01281e-05 15559