EnhancerDB
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  3. rs72671300[chr1:42420969]
Enhancers that have rs72671300[chr1:42420969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs72671300[chr1:42420969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42420954 42420975 IRF1 JASPAR yes 28441677
chr1 42420958 42420973 PRDM1 JASPAR yes 28441679
chr1 42420958 42420973 STAT2 JASPAR yes 28441680
chr1 42420958 42420976 IRF2 JASPAR yes 28441681
chr1 42420960 42420981 IRF1 JASPAR yes 28441682
Genes associated with rs72671300[chr1:42420969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More