-
Home
- SNP
- rs72709279[chr1:175809184]
Enhancers that have rs72709279[chr1:175809184]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
175806945 |
175816795 |
enh50065 |
|
|
Transcript factors that have rs72709279[chr1:175809184]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
175808997
|
175809256
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21351990
|
|
|
chr1
|
175809179
|
175809194
|
NR2C2
|
JASPAR
|
yes
|
|
33305239
|
|
|
chr1
|
175809182
|
175809186
|
LFA1
|
TRANSFAC
|
yes
|
|
33305240
|
|
|
chr1
|
175809182
|
175809862
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21351991
|
|
Genes associated with rs72709279[chr1:175809184], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |