EnhancerDB
  1. Home
  2. SNP
  3. rs72724197[chr1:185409341]
Enhancers that have rs72724197[chr1:185409341]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185406085 185413495 enh12475
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Lung (PC-9) Pancreas Spleen Blood (T-cell) Epithelial (MCF-7)
chr1 185409237 185409536 vista4267
VISTA
Transcript factors that have rs72724197[chr1:185409341]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185408266 185409807 ZNF274 GTRD no Blood (GM12878) 107852308
chr1 185408266 185409807 ZNF274 GTRD no Blood (GM12878) 107852309
chr1 185408266 185409807 ZNF274 GTRD no Blood (GM12878) 107852310
chr1 185408605 185409392 ZNF274 GTRD no Blood (GM12878) 107852316
chr1 185408605 185409392 ZNF274 GTRD no Blood (GM12878) 107852317
chr1 185408807 185409403 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852326
chr1 185408807 185409403 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852327
chr1 185409159 185409755 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852358
chr1 185409159 185409755 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852359
chr1 185409198 185409817 ZNF274 GTRD no Bone Marrow (K562) 107852360
chr1 185409198 185409817 ZNF274 GTRD no Bone Marrow (K562) 107852361
chr1 185409209 185409729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852362
chr1 185409209 185409729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852363
chr1 185409275 185410104 ZNF274 GTRD no Bone Marrow (K562) 107852364
chr1 185409314 185409714 ZNF274 GTRD no Bone Marrow (K562) 107852365
chr1 185409317 185409715 ZNF274 GTRD no Bone Marrow (K562) 107852366
chr1 185409330 185409627 NFATC1 UCSC Txn Factor no Conserved 107852367
chr1 185409330 185409627 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852368
chr1 185409338 185409662 ZNF143 GTRD no Epithelial (MCF-7) 21359352
chr1 185409338 185409662 ZNF143 GTRD no Epithelial (MCF-7) 107852369
chr1 185409340 185409353 SMAD2 JASPAR yes 33810813
chr1 185409340 185409353 SMAD2 JASPAR yes 118417417
Genes associated with rs72724197[chr1:185409341], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More