EnhancerDB
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  3. rs72824794[chr17:42660806]
Enhancers that have rs72824794[chr17:42660806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42659396 42669330 enh32202
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Lung (A549) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs72824794[chr17:42660806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42659942 42661122 ZNF143 GTRD no Epithelial (MCF-7) 21762650
chr17 42660167 42661205 ZNF143 GTRD no Epithelial (MCF-7) 21762651
chr17 42660181 42662118 ZBTB33 GTRD no Lung (A549) 21762652
chr17 42660218 42661554 ZBTB33 GTRD no Lung (A549) 21762653
chr17 42660230 42661173 ZBTB33 GTRD no Lung (A549) 21762654
chr17 42660242 42661167 ZNF143 GTRD no Epithelial (MCF-7) 21762655
chr17 42660283 42661329 ZBTB33 GTRD no Lung (A549) 21762656
chr17 42660291 42661466 ZBTB33 GTRD no Brain (SK-N-SH) 21762657
chr17 42660299 42661174 ZNF143 GTRD no Epithelial (MCF-7) 21762658
chr17 42660307 42661449 ZNF143 GTRD no Epithelial (MCF-7) 21762659
chr17 42660320 42661100 ZBTB33 GTRD no Brain (SK-N-SH) 21762660
chr17 42660326 42661313 ZBTB33 GTRD no Brain (SK-N-SH) 21762661
chr17 42660348 42661356 ZBTB33 GTRD no Brain (SK-N-SH) 21762662
chr17 42660349 42661271 ZBTB33 GTRD no Brain (SK-N-SH) 21762663
chr17 42660359 42661206 ZBTB33 GTRD no Brain (SK-N-SH) 21762664
chr17 42660388 42661302 ZBTB33 GTRD no Lung (A549) 21762665
chr17 42660403 42661252 ZBTB33 GTRD no Brain (SK-N-SH) 21762666
chr17 42660413 42661307 ZBTB33 GTRD no Brain (SK-N-SH) 21762667
chr17 42660420 42660981 ZNF143 GTRD no Epithelial (MCF-7) 21762668
chr17 42660451 42661180 ZBTB33 GTRD no Lung (A549) 21762669
chr17 42660464 42661157 ZBTB33 GTRD no Lung (A549) 21762670
chr17 42660476 42661470 ZBTB33 GTRD no Brain (SK-N-SH) 21762671
chr17 42660486 42661253 ZNF143 GTRD no Epithelial (MCF-7) 21762672
chr17 42660538 42661314 ZBTB33 GTRD no Brain (SK-N-SH) 21762673
chr17 42660564 42661100 ZNF143 GTRD no Epithelial (MCF-7) 21762674
chr17 42660589 42661193 ZBTB33 GTRD no Brain (SK-N-SH) 21762675
chr17 42660599 42661257 ZNF143 GTRD no Epithelial (MCF-7) 21762676
chr17 42660608 42661122 ZBTB33 GTRD no Brain (SK-N-SH) 21762677
chr17 42660616 42661202 ZBTB33 GTRD no Lung (A549) 21762678
chr17 42660633 42661109 ZNF143 GTRD no Epithelial (MCF-7) 21762679
chr17 42660638 42661124 ZNF143 GTRD no Epithelial (MCF-7) 21762680
chr17 42660638 42661144 ZNF143 GTRD no Epithelial (MCF-7) 21762681
chr17 42660645 42661202 ZBTB33 GTRD no Brain (SK-N-SH) 21762682
chr17 42660670 42661116 MYOD GTRD no Muscle (Myoblast) 21762683
chr17 42660676 42661211 ZBTB33 GTRD no Brain (SK-N-SH) 21762684
chr17 42660677 42661344 ZBTB33 GTRD no Brain (SK-N-SH) 21762685
chr17 42660680 42661056 ZNF143 GTRD no Epithelial (MCF-7) 21762686
chr17 42660693 42661111 ZNF143 GTRD no Epithelial (MCF-7) 21762687
chr17 42660699 42661175 ZBTB33 GTRD no Brain (SK-N-SH) 21762688
chr17 42660703 42661111 ZNF143 GTRD no Epithelial (MCF-7) 21762689
chr17 42660798 42660807 NKX3-2 JASPAR yes 54407428
chr17 42660803 42660814 ELF5 JASPAR yes 54407429
chr17 42660803 42660815 EHF JASPAR yes 54407430
chr17 42660803 42660815 ELF1 JASPAR yes 54407431
chr17 42660803 42660815 ELF4 JASPAR yes 54407432
chr17 42660803 42660816 ELF1 JASPAR yes 54407433
chr17 42660803 42660817 SPI1 JASPAR yes 54407434
chr17 42660803 42660817 SPIC JASPAR yes 54407435
Genes associated with rs72824794[chr17:42660806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More