EnhancerDB
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  3. rs72856336[chr1:8091963]
Enhancers that have rs72856336[chr1:8091963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8089365 8111955 enh11459
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs72856336[chr1:8091963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8088588 8098693 TCF7L2 GTRD no Colon (HCT116) 21325212
chr1 8091960 8091970 HOXA13 JASPAR yes 26501885
chr1 8091960 8091970 HOXB13 JASPAR yes 26501886
chr1 8091960 8091970 HOXD13 JASPAR yes 26501887
chr1 8091960 8091971 HOXA10 JASPAR yes 26501888
chr1 8091961 8091970 CDX1 JASPAR yes 26501889
chr1 8091961 8091972 CDX2 JASPAR yes 26501890
chr1 8091962 8091974 MEF2A JASPAR yes 26501891
chr1 8091962 8091974 MEF2B JASPAR yes 26501892
chr1 8091962 8091974 MEF2D JASPAR yes 26501893
Genes associated with rs72856336[chr1:8091963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More