EnhancerDB
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  3. rs72861090[chr2:29326296]
Enhancers that have rs72861090[chr2:29326296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 29326250 29340371 enh18402
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs72861090[chr2:29326296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 29326291 29326307 POU4F2 JASPAR yes 72687971
chr2 29326291 29326307 POU4F3 JASPAR yes 72687972
chr2 29326292 29326302 PAX3 JASPAR yes 72687973
chr2 29326292 29326302 PAX7 JASPAR yes 72687974
chr2 29326293 29326307 POU4F1 JASPAR yes 72687975
chr2 29326294 29326304 MNX1 JASPAR yes 72687976
chr2 29326294 29326304 POU6F1 JASPAR yes 72687977
chr2 29326294 29326308 POU4F1 JASPAR yes 72687978
chr2 29326294 29326310 POU4F3 JASPAR yes 72687979
chr2 29326295 29326303 LMX1A JASPAR yes 72687980
chr2 29326295 29326303 LMX1B JASPAR yes 72687981
chr2 29326295 29326303 NKX6-1 JASPAR yes 72687982
chr2 29326295 29326303 NKX6-2 JASPAR yes 72687983
chr2 29326295 29326303 VAX1 JASPAR yes 72687984
chr2 29326295 29326303 VAX2 JASPAR yes 72687985
chr2 29326295 29326303 VSX1 JASPAR yes 72687986
chr2 29326295 29326303 VSX2 JASPAR yes 72687987
Genes associated with rs72861090[chr2:29326296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More