EnhancerDB
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  3. rs72880055[chr17:74991601]
Enhancers that have rs72880055[chr17:74991601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74987865 75002035 enh17394
Prostate (PC-3) Liver (HepG2) Blood (T-cell) Astrocyte Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus
chr17 74991518 74991908 vista26064
VISTA
Transcript factors that have rs72880055[chr17:74991601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74989923 74992365 TCF7L2 GTRD no Colon (HCT116) 108296460
chr17 74991294 74991874 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108296461
chr17 74991343 74992895 ZNF274 GTRD no Cervix (HeLa-S3) 108296462
chr17 74991385 74992948 AR GTRD no Prostate (PC-3) 21789226
chr17 74991385 74992948 AR GTRD no Prostate (PC-3) 108296463
chr17 74991410 74991730 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108296464
chr17 74991423 74993224 ZBTB33 GTRD no Lung (A549) 108296465
chr17 74991426 74991756 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108296466
chr17 74991445 74991721 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21789227
chr17 74991445 74991721 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108296467
chr17 74991456 74991746 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21789228
chr17 74991456 74991746 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108296468
chr17 74991478 74991768 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21789229
chr17 74991478 74991768 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108296469
chr17 74991485 74991809 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108296470
chr17 74991495 74992226 TCF7L2 GTRD no Colon (HCT116) 108296471
chr17 74991495 74992530 ZBTB33 GTRD no Lung (A549) 108296472
chr17 74991496 74992343 ZBTB33 GTRD no Lung (A549) 108296473
chr17 74991497 74994103 ZBTB33 GTRD no Lung (A549) 108296474
chr17 74991497 74994103 ZBTB33 GTRD no Lung (A549) 108296475
chr17 74991508 74992504 ZNF143 GTRD no Epithelial (MCF-7) 108296476
chr17 74991531 74991795 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108296477
chr17 74991555 74992466 ZNF143 GTRD no Epithelial (MCF-7) 108296478
chr17 74991556 74991780 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21789230
chr17 74991556 74991780 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108296479
chr17 74991584 74992240 TCF7L2 GTRD no Colon (HCT116) 108296480
chr17 74991584 74992341 ZBTB33 GTRD no Lung (A549) 108296481
chr17 74991594 74991609 LEF1 JASPAR yes 21300579
chr17 74991594 74991609 LEF1 JASPAR yes 56034809
chr17 74991595 74991609 TCF7L2 JASPAR yes 21300580
chr17 74991595 74991609 TCF7L2 JASPAR yes 56034810
Genes associated with rs72880055[chr17:74991601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More