EnhancerDB
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  3. rs72957343[chr1:42186912]
Enhancers that have rs72957343[chr1:42186912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs72957343[chr1:42186912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42186892 42186913 IRF1 JASPAR yes 28413539
chr1 42186897 42186915 IRF2 JASPAR yes 28413546
chr1 42186898 42186919 IRF1 JASPAR yes 28413547
chr1 42186900 42186915 PRDM1 JASPAR yes 28413548
chr1 42186900 42186915 STAT2 JASPAR yes 28413549
chr1 42186902 42186914 IRF1 JASPAR yes 28413550
chr1 42186902 42186916 IRF8 JASPAR yes 28413551
chr1 42186902 42186917 IRF9 JASPAR yes 28413552
Genes associated with rs72957343[chr1:42186912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More