EnhancerDB
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  3. rs72957387[chr1:42214461]
Enhancers that have rs72957387[chr1:42214461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs72957387[chr1:42214461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42214451 42214465 GLIS2 JASPAR yes 28417057
chr1 42214451 42214465 ZIC1 JASPAR yes 28417058
chr1 42214451 42214466 ZIC3 JASPAR yes 28417059
chr1 42214451 42214466 ZIC4 JASPAR yes 28417060
chr1 42214456 42214467 E2F1 JASPAR yes 28417061
chr1 42214459 42214471 ZBTB7A JASPAR yes 28417062
chr1 42214460 42214465 SP1 TRANSFAC yes 28417063
Genes associated with rs72957387[chr1:42214461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More