EnhancerDB
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  3. rs72961274[chr1:42272629]
Enhancers that have rs72961274[chr1:42272629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
chr1 42272535 42272820 vista1359
VISTA
Transcript factors that have rs72961274[chr1:42272629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42272383 42272899 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802981
chr1 42272612 42272633 MAFG JASPAR yes 28424825
chr1 42272612 42272633 MAFG JASPAR yes 118280207
chr1 42272617 42272635 MAFF JASPAR yes 28424834
chr1 42272617 42272635 MAFF JASPAR yes 118280216
chr1 42272618 42272629 FOSL2 JASPAR yes 28424836
chr1 42272618 42272629 JUNB JASPAR yes 28424837
chr1 42272618 42272629 FOSL2 JASPAR yes 118280218
chr1 42272618 42272629 JUNB JASPAR yes 118280219
chr1 42272618 42272632 JUN JASPAR yes 28424838
chr1 42272618 42272632 JUN JASPAR yes 118280220
chr1 42272618 42272633 MAFK JASPAR yes 28424839
chr1 42272618 42272633 MAFK JASPAR yes 118280221
chr1 42272619 42272630 BATF JASPAR yes 28424840
chr1 42272619 42272630 BATF JASPAR yes 118280222
chr1 42272624 42272638 RORA JASPAR yes 28424841
chr1 42272624 42272638 RORA JASPAR yes 118280223
chr1 42272627 42272631 YY1 TRANSFAC yes 28424842
chr1 42272627 42272631 YY1 TRANSFAC yes 118280224
chr1 42272629 42272647 ESR2 JASPAR yes 28424843
chr1 42272629 42272647 ESR2 JASPAR yes 118280225
Genes associated with rs72961274[chr1:42272629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More