EnhancerDB
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  3. rs73364218[chr17:73546307]
Enhancers that have rs73364218[chr17:73546307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73541846 73552035 enh17378
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Placenta Colon (HCT116) Thyroid Pancreas Epithelial (MCF-7)
Transcript factors that have rs73364218[chr17:73546307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73544628 73547339 TCF7L2 GTRD no Colon (HCT116) 21787993
chr17 73544628 73547339 TCF7L2 GTRD no Colon (HCT116) 108294350
chr17 73544628 73547339 TCF7L2 GTRD no Colon (HCT116) 108294351
chr17 73544940 73546761 TCF7L2 GTRD no Colon (HCT116) 21787994
chr17 73544940 73546761 TCF7L2 GTRD no Colon (HCT116) 108294352
chr17 73544940 73546761 TCF7L2 GTRD no Colon (HCT116) 108294353
chr17 73545360 73546463 POLR2A UCSC Txn Factor no Conserved 108294362
chr17 73545360 73546463 POLR2A UCSC Txn Factor no Conserved 108294363
chr17 73545580 73547600 P63 GTRD no Skin (Keratinocyte) 108294395
chr17 73545580 73547600 P63 GTRD no Skin (Keratinocyte) 108294396
chr17 73545626 73547303 TCF7L2 GTRD no Colon (HCT116) 21788022
chr17 73545626 73547303 TCF7L2 GTRD no Colon (HCT116) 108294402
chr17 73545626 73547303 TCF7L2 GTRD no Colon (HCT116) 108294403
chr17 73545673 73547555 P63 GTRD no Skin (Keratinocyte) 108294408
chr17 73545673 73547555 P63 GTRD no Skin (Keratinocyte) 108294409
chr17 73545702 73546312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108294410
chr17 73545702 73546312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108294411
chr17 73545747 73546647 P63 GTRD no Skin (Keratinocyte) 108294414
chr17 73545774 73547426 P63 GTRD no Skin (Keratinocyte) 108294416
chr17 73545844 73546788 TCF7L2 GTRD no Colon (HCT116) 21788028
chr17 73545844 73546788 TCF7L2 GTRD no Colon (HCT116) 108294417
chr17 73546067 73547336 TCF7L2 GTRD no Colon (HCT116) 21788031
chr17 73546067 73547336 TCF7L2 GTRD no Colon (HCT116) 108294422
chr17 73546138 73546448 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21788032
chr17 73546138 73546448 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108294423
chr17 73546157 73546755 ZNF143 GTRD no Epithelial (MCF-7) 21788033
chr17 73546157 73546755 ZNF143 GTRD no Epithelial (MCF-7) 108294424
chr17 73546286 73546307 REST JASPAR yes 55962709
Genes associated with rs73364218[chr17:73546307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 73496342 73511664 - CASKIN2 ENSG00000177303.5 73511664 34643 Pancreas 0.12116 16250