EnhancerDB
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  3. rs73399178[chr15:40180329]
Enhancers that have rs73399178[chr15:40180329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40165269 40184115 enh31319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Astrocyte Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs73399178[chr15:40180329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40179848 40180338 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649083
chr15 40179848 40180338 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133347
chr15 40179848 40180338 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133348
chr15 40179923 40180370 CTCF UCSC Txn Factor no Conserved 108133351
chr15 40179973 40180333 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133352
chr15 40180027 40180363 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649086
chr15 40180027 40180363 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133355
chr15 40180039 40180329 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108133362
chr15 40180115 40180751 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649093
chr15 40180115 40180751 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133367
chr15 40180160 40180436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649094
chr15 40180160 40180436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108133368
chr15 40180161 40180451 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21649095
chr15 40180161 40180451 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108133369
chr15 40180215 40180340 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21649096
chr15 40180215 40180340 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108133370
chr15 40180217 40180487 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108133371
chr15 40180324 40180330 LEF1 TRANSFAC yes 22917790
chr15 40180324 40180330 SOX10 JASPAR yes 22917791
Genes associated with rs73399178[chr15:40180329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More