EnhancerDB
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  3. rs736553[chr1:25242193]
Enhancers that have rs736553[chr1:25242193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25234025 25245136 enh26586
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs736553[chr1:25242193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25242186 25242199 TFAP2A JASPAR yes 27544503
chr1 25242186 25242199 TFAP2B JASPAR yes 27544504
chr1 25242186 25242199 TFAP2C JASPAR yes 27544505
chr1 25242187 25242199 TFAP2A JASPAR yes 27544506
chr1 25242187 25242199 TFAP2B JASPAR yes 27544507
chr1 25242187 25242202 TFAP2A JASPAR yes 27544508
chr1 25242188 25242199 TFAP2A JASPAR yes 27544509
chr1 25242188 25242199 TFAP2B JASPAR yes 27544510
chr1 25242188 25242199 TFAP2C JASPAR yes 27544511
chr1 25242189 25242198 TFAP2A JASPAR yes 27544512
Genes associated with rs736553[chr1:25242193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More