EnhancerDB
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  3. rs74658409[chr1:220543544]
Enhancers that have rs74658409[chr1:220543544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs74658409[chr1:220543544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220543282 220543752 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21381685
chr1 220543293 220543823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381686
chr1 220543467 220543622 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381689
chr1 220543508 220543838 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381690
chr1 220543512 220544042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381691
chr1 220543540 220543555 MEF2C JASPAR yes 35489373
chr1 220543541 220543556 MEF2A JASPAR yes 35489374
chr1 220543542 220543554 MEF2A JASPAR yes 35489375
chr1 220543542 220543554 MEF2B JASPAR yes 35489376
chr1 220543542 220543554 MEF2D JASPAR yes 35489377
chr1 220543542 220543609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381692
chr1 220543543 220543553 MEF2A JASPAR yes 35489378
Genes associated with rs74658409[chr1:220543544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More