EnhancerDB
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  3. rs74820860[chr1:117048813]
Enhancers that have rs74820860[chr1:117048813]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs74820860[chr1:117048813]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117048574 117049124 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333307
chr1 117048724 117048988 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333308
chr1 117048740 117049136 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333309
chr1 117048741 117049071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333310
chr1 117048805 117048824 REST JASPAR yes 31815210
Genes associated with rs74820860[chr1:117048813], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More