EnhancerDB
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  3. rs74883939[chr1:117037178]
Enhancers that have rs74883939[chr1:117037178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs74883939[chr1:117037178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117036247 117037203 AR GTRD no Prostate (PC-3) 21333091
chr1 117036809 117037465 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21333094
chr1 117037012 117037668 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21333095
chr1 117037175 117037186 E2F6 JASPAR yes 31813610
chr1 117037176 117037191 FOXP1 JASPAR yes 31813611
chr1 117037178 117037195 RARA JASPAR yes 31813612
Genes associated with rs74883939[chr1:117037178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More