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- rs74985558[chr1:172828390]
Enhancers that have rs74985558[chr1:172828390]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
172826285 |
172832604 |
enh27244 |
|
|
Transcript factors that have rs74985558[chr1:172828390]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
172828221
|
172828725
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107846189
|
|
|
chr1
|
172828244
|
172828688
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
107846190
|
|
|
chr1
|
172828322
|
172828662
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107846191
|
|
|
chr1
|
172828326
|
172828722
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107846192
|
|
|
chr1
|
172828342
|
172828918
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
107846193
|
|
|
chr1
|
172828348
|
172828692
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107846194
|
|
|
chr1
|
172828360
|
172828690
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107846195
|
|
|
chr1
|
172828372
|
172828687
|
CEBPB
|
UCSC Txn Factor
|
no
|
Conserved
|
107846196
|
|
|
chr1
|
172828372
|
172828687
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107846197
|
|
|
chr1
|
172828385
|
172828705
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107846198
|
|
|
chr1
|
172828387
|
172828401
|
GATA2
|
JASPAR
|
yes
|
|
33157792
|
|
|
chr1
|
172828389
|
172828397
|
GATA3
|
JASPAR
|
yes
|
|
33157793
|
|
|
chr1
|
172828389
|
172828397
|
GATA5
|
JASPAR
|
yes
|
|
33157794
|
|
Genes associated with rs74985558[chr1:172828390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |