EnhancerDB
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  3. rs75117890[chr1:117035935]
Enhancers that have rs75117890[chr1:117035935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs75117890[chr1:117035935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117035727 117036860 ZNF274 GTRD no Bone Marrow (K562) 21333065
chr1 117035776 117036510 ZNF143 GTRD no Epithelial (MCF-7) 21333066
chr1 117035812 117036166 ZNF274 GTRD no Bone Marrow (K562) 21333067
chr1 117035860 117036950 ZNF274 GTRD no Bone Marrow (K562) 21333068
chr1 117035870 117036709 ZNF274 GTRD no Bone Marrow (K562) 21333069
chr1 117035870 117036757 ZNF274 GTRD no Bone Marrow (K562) 21333070
chr1 117035885 117036651 ZNF274 GTRD no Bone Marrow (K562) 21333071
chr1 117035934 117035939 GATA2 JASPAR yes 31813489
Genes associated with rs75117890[chr1:117035935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More