EnhancerDB
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  3. rs75253885[chr12:118123386]
Enhancers that have rs75253885[chr12:118123386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 118120925 118127377 enh15031
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs75253885[chr12:118123386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 118123019 118123677 GATA2 UCSC Txn Factor no Conserved 108062175
chr12 118123088 118123664 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062176
chr12 118123095 118123731 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062177
chr12 118123113 118123617 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062178
chr12 118123166 118123610 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21578015
chr12 118123166 118123610 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108062179
chr12 118123293 118123729 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062180
chr12 118123319 118123839 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062181
chr12 118123352 118123682 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062182
chr12 118123360 118123710 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062183
chr12 118123379 118123388 THAP1 JASPAR yes 124067250
chr12 118123379 118123390 GCM1 JASPAR yes 124067251
chr12 118123380 118123390 GCM2 JASPAR yes 124067252
chr12 118123381 118123691 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21578016
chr12 118123381 118123691 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108062184
Genes associated with rs75253885[chr12:118123386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More