EnhancerDB
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  3. rs7538699[chr1:35438480]
Enhancers that have rs7538699[chr1:35438480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 35434575 35438725 enh66884
Neural Stem Cells (H9)
Transcript factors that have rs7538699[chr1:35438480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 35438471 35438481 EN2 JASPAR yes 28081220
chr1 35438471 35438481 ESX1 JASPAR yes 28081221
chr1 35438471 35438481 GBX1 JASPAR yes 28081222
chr1 35438471 35438481 GBX2 JASPAR yes 28081223
chr1 35438471 35438481 GSX1 JASPAR yes 28081224
chr1 35438471 35438481 HESX1 JASPAR yes 28081225
chr1 35438471 35438481 HOXB3 JASPAR yes 28081226
chr1 35438471 35438481 LBX2 JASPAR yes 28081227
chr1 35438471 35438481 LHX2 JASPAR yes 28081228
chr1 35438471 35438481 RAX JASPAR yes 28081229
chr1 35438472 35438480 BARX1 JASPAR yes 28081230
chr1 35438472 35438480 BSX JASPAR yes 28081231
chr1 35438472 35438480 EN1 JASPAR yes 28081232
chr1 35438472 35438480 ISX JASPAR yes 28081233
chr1 35438472 35438480 LHX9 JASPAR yes 28081234
chr1 35438472 35438480 MSX1 JASPAR yes 28081235
chr1 35438472 35438480 MSX2 JASPAR yes 28081236
chr1 35438472 35438480 PRRX1 JASPAR yes 28081237
chr1 35438472 35438480 RAX2 JASPAR yes 28081238
chr1 35438472 35438480 SHOX JASPAR yes 28081239
chr1 35438472 35438481 VENTX JASPAR yes 28081240
Genes associated with rs7538699[chr1:35438480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More