EnhancerDB
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  3. rs7540115[chr1:200265618]
Enhancers that have rs7540115[chr1:200265618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs7540115[chr1:200265618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200264473 200266432 ZNF143 GTRD no Epithelial (MCF-7) 21362880
chr1 200264573 200265734 ZNF143 GTRD no Epithelial (MCF-7) 21362882
chr1 200264616 200266014 ZNF143 GTRD no Epithelial (MCF-7) 21362884
chr1 200264739 200265685 ZNF143 GTRD no Epithelial (MCF-7) 21362886
chr1 200264758 200265642 ZNF143 GTRD no Epithelial (MCF-7) 21362887
chr1 200265262 200265878 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362901
chr1 200265278 200265822 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362902
chr1 200265323 200265763 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362903
chr1 200265351 200265731 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362904
chr1 200265372 200265708 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362905
chr1 200265411 200265681 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362906
chr1 200265455 200265698 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362907
chr1 200265458 200265718 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362908
chr1 200265512 200265683 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362909
chr1 200265610 200265624 FOXF2 JASPAR yes 34430942
chr1 200265611 200265622 FOXH1 JASPAR yes 34430943
chr1 200265612 200265622 HOXA13 JASPAR yes 34430944
chr1 200265612 200265622 HOXB13 JASPAR yes 34430945
chr1 200265612 200265622 HOXD13 JASPAR yes 34430946
chr1 200265613 200265624 FOXP2 JASPAR yes 34430947
chr1 200265615 200265623 FOXG1 JASPAR yes 34430948
Genes associated with rs7540115[chr1:200265618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More