EnhancerDB
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Enhancers that have rs7540834[chr1:201325462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201311669 201327595 enh12519
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs7540834[chr1:201325462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201324020 201326023 ZNF143 GTRD no Epithelial (MCF-7) 21363994
chr1 201324044 201326052 ZNF143 GTRD no Epithelial (MCF-7) 21363995
chr1 201324355 201326110 ZNF143 GTRD no Epithelial (MCF-7) 21363996
chr1 201324790 201326068 ZNF143 GTRD no Epithelial (MCF-7) 21363998
chr1 201324830 201326110 ZNF143 GTRD no Epithelial (MCF-7) 21363999
chr1 201324970 201326057 ZNF143 GTRD no Epithelial (MCF-7) 21364000
chr1 201325199 201326227 ZNF143 GTRD no Epithelial (MCF-7) 21364001
chr1 201325251 201325952 ZNF143 GTRD no Epithelial (MCF-7) 21364002
chr1 201325332 201326083 ZNF143 GTRD no Epithelial (MCF-7) 21364003
chr1 201325456 201325466 GSC JASPAR yes 34492611
chr1 201325457 201325466 PITX3 JASPAR yes 34492612
Genes associated with rs7540834[chr1:201325462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More