EnhancerDB
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  3. rs7552672[chr1:185413074]
Enhancers that have rs7552672[chr1:185413074]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185406085 185413495 enh12475
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Lung (PC-9) Pancreas Spleen Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs7552672[chr1:185413074]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185412091 185413420 P63 GTRD no Skin (Keratinocyte) 21359379
chr1 185412318 185413434 P63 GTRD no Skin (Keratinocyte) 21359380
chr1 185412323 185413340 AR GTRD no Prostate (PC-3) 21359381
chr1 185412417 185413441 P63 GTRD no Skin (Keratinocyte) 21359382
chr1 185412444 185413421 P63 GTRD no Skin (Keratinocyte) 21359383
chr1 185412729 185413190 ZNF274 GTRD no Cervix (HeLa-S3) 21359384
chr1 185412752 185413279 ZNF143 GTRD no Epithelial (MCF-7) 21359385
chr1 185413063 185413078 FOXA1 JASPAR yes 33811372
chr1 185413065 185413076 FOXP2 JASPAR yes 33811374
chr1 185413065 185413077 FOXC2 JASPAR yes 33811375
chr1 185413066 185413074 FOXD1 JASPAR yes 33811376
chr1 185413066 185413074 FOXG1 JASPAR yes 33811377
chr1 185413066 185413074 FOXO3 JASPAR yes 33811378
chr1 185413066 185413077 FOXB1 JASPAR yes 33811379
chr1 185413066 185413077 FOXC1 JASPAR yes 33811380
chr1 185413067 185413074 FOXD2 JASPAR yes 33811381
chr1 185413067 185413074 FOXI1 JASPAR yes 33811382
chr1 185413067 185413074 FOXL1 JASPAR yes 33811383
chr1 185413067 185413074 FOXO4 JASPAR yes 33811384
chr1 185413067 185413074 FOXO6 JASPAR yes 33811385
chr1 185413067 185413074 FOXP3 JASPAR yes 33811386
chr1 185413067 185413075 FOXO3 JASPAR yes 33811387
chr1 185413067 185413078 FOXA1 JASPAR yes 33811388
Genes associated with rs7552672[chr1:185413074], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More