EnhancerDB
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  3. rs7552928[chr1:42086664]
Enhancers that have rs7552928[chr1:42086664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs7552928[chr1:42086664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42086663 42086671 TBX5 JASPAR yes 28402244
chr1 42086663 42086672 ZEB1 JASPAR yes 28402245
chr1 42086663 42086676 ZBTB18 JASPAR yes 28402246
chr1 42086664 42086674 ID4 JASPAR yes 28402247
chr1 42086664 42086674 TCF3 JASPAR yes 28402248
chr1 42086664 42086674 TCF4 JASPAR yes 28402249
Genes associated with rs7552928[chr1:42086664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More