EnhancerDB
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  3. rs7553030[chr1:42193431]
Enhancers that have rs7553030[chr1:42193431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
chr1 42192975 42193489 vista1347
VISTA
Transcript factors that have rs7553030[chr1:42193431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42193419 42193440 REST JASPAR yes 28414549
chr1 42193419 42193440 REST JASPAR yes 118279547
chr1 42193420 42193439 REST JASPAR yes 28414550
chr1 42193420 42193439 REST JASPAR yes 118279548
Genes associated with rs7553030[chr1:42193431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More