EnhancerDB
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  3. rs7553682[chr1:200308381]
Enhancers that have rs7553682[chr1:200308381]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs7553682[chr1:200308381]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200308297 200308767 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21363142
chr1 200308372 200308390 NFYA JASPAR yes 34436639
chr1 200308380 200308399 REST JASPAR yes 34436644
Genes associated with rs7553682[chr1:200308381], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More