EnhancerDB
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  3. rs7554038[chr1:117041688]
Enhancers that have rs7554038[chr1:117041688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7554038[chr1:117041688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117041492 117042042 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333125
chr1 117041575 117042015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333126
chr1 117041579 117042035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333127
chr1 117041582 117041946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333128
chr1 117041595 117041999 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333129
chr1 117041602 117041978 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21333130
chr1 117041621 117041951 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333131
chr1 117041632 117042088 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333132
chr1 117041658 117041934 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333133
chr1 117041672 117042042 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333134
chr1 117041674 117041944 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21333135
chr1 117041676 117041952 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333136
chr1 117041682 117041694 IRF1 JASPAR yes 31814225
Genes associated with rs7554038[chr1:117041688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More