EnhancerDB
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  3. rs755427319[chr17:62676547]
Enhancers that have rs755427319[chr17:62676547]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs755427319[chr17:62676547]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 21778864
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 108282545
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 21778870
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 108282546
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 21778871
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 108282547
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 21778872
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 108282548
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 21778873
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 108282549
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 21778877
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 108282551
chr17 62675780 62676776 TCF7L2 GTRD no Colon (HCT116) 21778885
chr17 62675780 62676776 TCF7L2 GTRD no Colon (HCT116) 108282558
chr17 62676541 62676556 HNF1A JASPAR yes 55310455
chr17 62676541 62676562 IRF1 JASPAR yes 55310456
chr17 62676542 62676563 IRF1 JASPAR yes 55310457
chr17 62676544 62676565 IRF1 JASPAR yes 55310458
chr17 62676545 62676566 IRF1 JASPAR yes 55310459
chr17 62676546 62676561 FOXP1 JASPAR yes 55310460
chr17 62676546 62676567 IRF1 JASPAR yes 55310461
chr17 62676547 62676562 FOXP1 JASPAR yes 55310462
chr17 62676547 62676568 IRF1 JASPAR yes 55310463
Genes associated with rs755427319[chr17:62676547], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More