EnhancerDB
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Enhancers that have rs7554610[chr1:45919034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45919008 45923158 enh66913
Neural Stem Cells (H9)
Transcript factors that have rs7554610[chr1:45919034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45919013 45919034 IRF1 JASPAR yes 28604230
chr1 45919014 45919035 IRF1 JASPAR yes 28604232
chr1 45919015 45919036 IRF1 JASPAR yes 28604234
chr1 45919016 45919037 IRF1 JASPAR yes 28604236
chr1 45919017 45919038 IRF1 JASPAR yes 28604238
chr1 45919018 45919039 IRF1 JASPAR yes 28604240
chr1 45919019 45919034 FOXP1 JASPAR yes 28604241
chr1 45919019 45919040 IRF1 JASPAR yes 28604242
chr1 45919020 45919035 FOXP1 JASPAR yes 28604243
chr1 45919020 45919041 IRF1 JASPAR yes 28604244
chr1 45919021 45919036 FOXP1 JASPAR yes 28604245
chr1 45919022 45919043 IRF1 JASPAR yes 28604246
chr1 45919023 45919038 FOXP1 JASPAR yes 28604247
chr1 45919024 45919039 STAT2 JASPAR yes 28604248
chr1 45919024 45919045 IRF1 JASPAR yes 28604249
chr1 45919025 45919040 FOXP1 JASPAR yes 28604250
chr1 45919026 45919047 IRF1 JASPAR yes 28604251
chr1 45919030 45919045 PRDM1 JASPAR yes 28604252
chr1 45919030 45919051 IRF1 JASPAR yes 28604253
chr1 45919032 45919053 IRF1 JASPAR yes 28604254
chr1 45919034 45919049 PRDM1 JASPAR yes 28604255
Genes associated with rs7554610[chr1:45919034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More