EnhancerDB
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  3. rs75950001[chr1:116848685]
Enhancers that have rs75950001[chr1:116848685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs75950001[chr1:116848685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116848553 116849529 ZNF274 GTRD no Bone Marrow (K562) 21331925
chr1 116848564 116849376 ZNF274 GTRD no Bone Marrow (K562) 21331926
chr1 116848565 116849283 ZNF274 GTRD no Bone Marrow (K562) 21331927
chr1 116848594 116849466 ZNF274 GTRD no Cervix (HeLa-S3) 21331928
chr1 116848666 116849548 ZNF143 GTRD no Epithelial (MCF-7) 21331929
chr1 116848678 116848688 HOXA13 JASPAR yes 31792002
chr1 116848678 116848688 HOXB13 JASPAR yes 31792003
chr1 116848678 116848688 HOXD13 JASPAR yes 31792004
chr1 116848679 116848688 CDX1 JASPAR yes 31792005
chr1 116848679 116848690 CDX2 JASPAR yes 31792006
chr1 116848681 116848694 HSF1 JASPAR yes 31792007
chr1 116848681 116848694 HSF2 JASPAR yes 31792008
Genes associated with rs75950001[chr1:116848685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More