EnhancerDB
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  3. rs76021839[chr19:1858960]
Enhancers that have rs76021839[chr19:1858960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1850045 1876795 enh4955
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
Transcript factors that have rs76021839[chr19:1858960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355215
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355216
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355217
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 21832698
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355222
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355223
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355224
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 21832714
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 108355235
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 108355236
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 108355237
chr19 1854794 1859026 ZNF274 GTRD no Blood (GM12878) 21832747
chr19 1854794 1859026 ZNF274 GTRD no Blood (GM12878) 108355291
chr19 1854794 1859026 ZNF274 GTRD no Blood (GM12878) 108355292
chr19 1854794 1859026 ZNF274 GTRD no Blood (GM12878) 108355293
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 21832748
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355295
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355296
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355297
chr19 1857472 1860706 ZNF274 GTRD no Bone Marrow (K562) 21833025
chr19 1857472 1860706 ZNF274 GTRD no Bone Marrow (K562) 108355719
chr19 1858947 1858961 GLIS2 JASPAR yes 112033325
chr19 1858947 1858961 GLIS3 JASPAR yes 112033326
chr19 1858957 1858972 TFAP2C JASPAR yes 112033327
chr19 1858958 1858969 EBF1 JASPAR yes 112033328
Genes associated with rs76021839[chr19:1858960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More