EnhancerDB
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Enhancers that have rs76578262[chr16:88533660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs76578262[chr16:88533660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 21736463
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222245
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222246
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222247
chr16 88528769 88536119 ZNF143 GTRD no Epithelial (MCF-7) 21736464
chr16 88528769 88536119 ZNF143 GTRD no Epithelial (MCF-7) 108222248
chr16 88528769 88536119 ZNF143 GTRD no Epithelial (MCF-7) 108222249
chr16 88531369 88536196 TCF7L2 GTRD no Colon (HCT116) 21736465
chr16 88531369 88536196 TCF7L2 GTRD no Colon (HCT116) 108222250
chr16 88531369 88536196 TCF7L2 GTRD no Colon (HCT116) 108222251
chr16 88531379 88536175 TCF7L2 GTRD no Colon (HCT116) 21736466
chr16 88531379 88536175 TCF7L2 GTRD no Colon (HCT116) 108222252
chr16 88531379 88536175 TCF7L2 GTRD no Colon (HCT116) 108222253
chr16 88531399 88536192 TCF7L2 GTRD no Colon (HCT116) 21736467
chr16 88531399 88536192 TCF7L2 GTRD no Colon (HCT116) 108222254
chr16 88531399 88536192 TCF7L2 GTRD no Colon (HCT116) 108222255
chr16 88531407 88535944 TCF7L2 GTRD no Colon (HCT116) 21736468
chr16 88531407 88535944 TCF7L2 GTRD no Colon (HCT116) 108222256
chr16 88531563 88536071 TCF7L2 GTRD no Colon (HCT116) 21736469
chr16 88531563 88536071 TCF7L2 GTRD no Colon (HCT116) 108222257
chr16 88531862 88536133 TCF7L2 GTRD no Colon (HCT116) 21736470
chr16 88531862 88536133 TCF7L2 GTRD no Colon (HCT116) 108222258
chr16 88531862 88536133 TCF7L2 GTRD no Colon (HCT116) 108222259
chr16 88531995 88536183 TCF7L2 GTRD no Colon (HCT116) 21736471
chr16 88531995 88536183 TCF7L2 GTRD no Colon (HCT116) 108222260
chr16 88531995 88536183 TCF7L2 GTRD no Colon (HCT116) 108222261
chr16 88533014 88535348 TCF7L2 GTRD no Colon (HCT116) 21736472
chr16 88533014 88535348 TCF7L2 GTRD no Colon (HCT116) 108222262
chr16 88533204 88535071 TCF7L2 GTRD no Colon (HCT116) 21736473
chr16 88533204 88535071 TCF7L2 GTRD no Colon (HCT116) 108222263
chr16 88533423 88535390 TCF7L2 GTRD no Colon (HCT116) 21736474
chr16 88533423 88535390 TCF7L2 GTRD no Colon (HCT116) 108222264
chr16 88533453 88536151 ZNF143 GTRD no Epithelial (MCF-7) 21736475
chr16 88533453 88536151 ZNF143 GTRD no Epithelial (MCF-7) 108222265
chr16 88533453 88536151 ZNF143 GTRD no Epithelial (MCF-7) 108222266
chr16 88533526 88536078 ZNF143 GTRD no Epithelial (MCF-7) 21736476
chr16 88533526 88536078 ZNF143 GTRD no Epithelial (MCF-7) 108222267
chr16 88533553 88535342 TCF7L2 GTRD no Colon (HCT116) 21736477
chr16 88533553 88535342 TCF7L2 GTRD no Colon (HCT116) 108222268
chr16 88533627 88535975 ZNF143 GTRD no Epithelial (MCF-7) 21736478
chr16 88533627 88535975 ZNF143 GTRD no Epithelial (MCF-7) 108222269
Genes associated with rs76578262[chr16:88533660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More