EnhancerDB
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  3. rs76780849[chr1:42085308]
Enhancers that have rs76780849[chr1:42085308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs76780849[chr1:42085308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42085301 42085312 USF1 JASPAR yes 28402063
chr1 42085301 42085312 USF2 JASPAR yes 28402064
chr1 42085301 42085313 PKNOX2 JASPAR yes 28402065
chr1 42085302 42085309 USF2 TRANSFAC yes 28402066
chr1 42085302 42085312 SREBF1 JASPAR yes 28402067
chr1 42085302 42085312 SREBF2 JASPAR yes 28402068
chr1 42085302 42085312 TFEC JASPAR yes 28402069
chr1 42085302 42085313 USF1 JASPAR yes 28402070
chr1 42085304 42085309 USF2 TRANSFAC yes 28402071
Genes associated with rs76780849[chr1:42085308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More