EnhancerDB
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  3. rs76827530[chr16:85419018]
Enhancers that have rs76827530[chr16:85419018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85390172 85421515 enh16868
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs76827530[chr16:85419018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724644
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724645
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214247
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214248
chr16 85417977 85421817 ZNF143 GTRD no Epithelial (MCF-7) 21724655
chr16 85417977 85421817 ZNF143 GTRD no Epithelial (MCF-7) 108214249
chr16 85418004 85419030 ZNF274 GTRD no Bone Marrow (K562) 21724656
chr16 85418004 85419030 ZNF274 GTRD no Bone Marrow (K562) 108214250
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 21724657
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 21724658
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 108214251
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 108214252
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 21724659
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 21724660
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 108214253
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 108214254
chr16 85418053 85423618 ZNF143 GTRD no Epithelial (MCF-7) 21724661
chr16 85418053 85423618 ZNF143 GTRD no Epithelial (MCF-7) 21724662
chr16 85418053 85423618 ZNF143 GTRD no Epithelial (MCF-7) 108214255
chr16 85418055 85424130 ZNF143 GTRD no Epithelial (MCF-7) 21724663
chr16 85418055 85424130 ZNF143 GTRD no Epithelial (MCF-7) 21724664
chr16 85418055 85424130 ZNF143 GTRD no Epithelial (MCF-7) 108214256
chr16 85418081 85419588 TCF7L2 GTRD no Colon (HCT116) 108214257
chr16 85418082 85419597 TCF7L2 GTRD no Colon (HCT116) 108214258
chr16 85418373 85419669 ZNF274 GTRD no Bone Marrow (K562) 21724671
chr16 85418373 85419669 ZNF274 GTRD no Bone Marrow (K562) 108214262
chr16 85418628 85419794 ZBTB33 GTRD no Lung (A549) 108214265
chr16 85418660 85419711 ZNF274 GTRD no Cervix (HeLa-S3) 21724673
chr16 85418735 85419716 ZNF143 GTRD no Epithelial (MCF-7) 21724674
chr16 85418743 85419508 ZNF274 GTRD no Bone Marrow (K562) 21724675
chr16 85418773 85419749 ZNF274 GTRD no Bone Marrow (K562) 21724676
chr16 85418892 85419541 ZNF274 GTRD no Bone Marrow (K562) 21724677
chr16 85418968 85419471 ZNF274 GTRD no Bone Marrow (K562) 21724678
chr16 85418978 85419556 ZNF143 GTRD no Epithelial (MCF-7) 21724679
chr16 85419010 85419031 REST JASPAR yes 12055250
chr16 85419011 85419030 REST JASPAR yes 12055251
Genes associated with rs76827530[chr16:85419018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More