EnhancerDB
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  3. rs77238557[chr1:42080912]
Enhancers that have rs77238557[chr1:42080912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs77238557[chr1:42080912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42080899 42080913 ONECUT3 JASPAR yes 28401428
chr1 42080899 42080914 HNF1A JASPAR yes 28401429
chr1 42080900 42080913 HNF1B JASPAR yes 28401430
chr1 42080900 42080914 POU4F1 JASPAR yes 28401431
chr1 42080900 42080916 POU4F2 JASPAR yes 28401432
chr1 42080900 42080916 POU4F3 JASPAR yes 28401433
chr1 42080901 42080912 FOXB1 JASPAR yes 28401434
chr1 42080901 42080912 FOXC1 JASPAR yes 28401435
chr1 42080901 42080912 PROP1 JASPAR yes 28401436
chr1 42080901 42080913 FOXC2 JASPAR yes 28401437
chr1 42080902 42080914 FOXI1 JASPAR yes 28401438
chr1 42080909 42082061 ZNF143 GTRD no Epithelial (MCF-7) 107802961
Genes associated with rs77238557[chr1:42080912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More