EnhancerDB
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  3. rs77318880[chr1:220542057]
Enhancers that have rs77318880[chr1:220542057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs77318880[chr1:220542057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220541816 220542123 ZNF274 GTRD no Cervix (HeLa-S3) 21381679
chr1 220541823 220542154 ZNF143 GTRD no Epithelial (MCF-7) 21381680
chr1 220541841 220542252 ZNF143 GTRD no Epithelial (MCF-7) 21381681
chr1 220541842 220542168 ZNF143 GTRD no Epithelial (MCF-7) 21381682
chr1 220541861 220542117 ZNF143 GTRD no Epithelial (MCF-7) 21381683
chr1 220541901 220542154 ZNF143 GTRD no Epithelial (MCF-7) 21381684
chr1 220542050 220542066 POU4F2 JASPAR yes 35489103
chr1 220542050 220542066 POU4F3 JASPAR yes 35489104
chr1 220542052 220542066 POU4F1 JASPAR yes 35489105
chr1 220542057 220542069 MEF2B JASPAR yes 35489106
Genes associated with rs77318880[chr1:220542057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More