EnhancerDB
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  3. rs777710065[chr17:62682405]
Enhancers that have rs777710065[chr17:62682405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs777710065[chr17:62682405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62679248 62683082 ZNF143 GTRD no Epithelial (MCF-7) 21778916
chr17 62679301 62682615 ZNF143 GTRD no Epithelial (MCF-7) 21778918
chr17 62679402 62682688 ZNF143 GTRD no Epithelial (MCF-7) 21778920
chr17 62681214 62682443 AR GTRD no Prostate (PC-3) 21778943
chr17 62681354 62682610 ZNF143 GTRD no Epithelial (MCF-7) 21778944
chr17 62681395 62682767 TCF7L2 GTRD no Colon (HCT116) 21778945
chr17 62681516 62682479 TCF7L2 GTRD no Colon (HCT116) 21778946
chr17 62681627 62682495 TCF7L2 GTRD no Colon (HCT116) 21778947
chr17 62681685 62682753 TCF7L2 GTRD no Colon (HCT116) 21778948
chr17 62682399 62682409 MEF2A JASPAR yes 55311534
chr17 62682401 62682416 PRDM1 JASPAR yes 55311535
chr17 62682401 62682422 IRF1 JASPAR yes 55311536
chr17 62682402 62682423 ZNF263 JASPAR yes 55311537
chr17 62682403 62682424 IRF1 JASPAR yes 55311538
chr17 62682404 62682425 ZNF263 JASPAR yes 55311539
chr17 62682405 62682420 PRDM1 JASPAR yes 55311540
Genes associated with rs777710065[chr17:62682405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More