-
Home
- SNP
- rs77859866[chr19:3551638]
Enhancers that have rs77859866[chr19:3551638]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3550863 |
3556635 |
enh4966 |
|
|
| chr19 |
3551628 |
3551981 |
vista28301 |
|
|
Transcript factors that have rs77859866[chr19:3551638]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3550687
|
3551828
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367695
|
|
|
chr19
|
3550693
|
3552021
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367696
|
|
|
chr19
|
3550734
|
3552275
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108367697
|
|
|
chr19
|
3550801
|
3552496
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367698
|
|
|
chr19
|
3551091
|
3552244
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367699
|
|
|
chr19
|
3551201
|
3551677
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367700
|
|
|
chr19
|
3551406
|
3552127
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108367701
|
|
|
chr19
|
3551518
|
3551870
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108367702
|
|
|
chr19
|
3551557
|
3552007
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108367703
|
|
|
chr19
|
3551627
|
3551647
|
ESR1
|
JASPAR
|
yes
|
|
70787767
|
|
|
chr19
|
3551627
|
3551647
|
ESR1
|
JASPAR
|
yes
|
|
112138451
|
|
Genes associated with rs77859866[chr19:3551638], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
4304597
|
4323840
|
+
|
FSD1
|
ENSG00000105255.6
|
4304597
|
752959
|
Lung
|
0.23871
|
16837
|
|