Enhancers that have rs78090439[chr1:28589442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28588185 28594381 enh49693

Transcript factors that have rs78090439[chr1:28589442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28589436 28589451 FOXP1 JASPAR yes 27754821
chr1 28589436 28589457 IRF1 JASPAR yes 27754822
chr1 28589438 28589450 FOXC2 JASPAR yes 27754823
chr1 28589438 28589458 RREB1 JASPAR yes 27754824
chr1 28589439 28589450 FOXP2 JASPAR yes 27754825
chr1 28589440 28589455 STAT2 JASPAR yes 27754826
chr1 28589441 28589453 IRF1 JASPAR yes 27754827
chr1 28589441 28589456 FOXP1 JASPAR yes 27754828
chr1 28589441 28589462 IRF1 JASPAR yes 27754829

Genes associated with rs78090439[chr1:28589442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More