EnhancerDB
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  3. rs78143226[chr12:122449257]
Enhancers that have rs78143226[chr12:122449257]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122426565 122450555 enh2654
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs78143226[chr12:122449257]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122448966 122450143 TEF1 GTRD no Bone (Osteoblast) 21579592
chr12 122449004 122450162 ZNF143 GTRD no Epithelial (MCF-7) 21579593
chr12 122449038 122450083 ZNF143 GTRD no Epithelial (MCF-7) 21579594
chr12 122449076 122450198 ZNF143 GTRD no Epithelial (MCF-7) 21579595
chr12 122449130 122449981 ZNF143 GTRD no Epithelial (MCF-7) 21579596
chr12 122449157 122450100 P63 GTRD no Skin (Keratinocyte) 21579597
chr12 122449171 122449903 ZNF143 GTRD no Epithelial (MCF-7) 21579598
chr12 122449171 122449914 ZNF143 GTRD no Epithelial (MCF-7) 21579599
chr12 122449176 122449760 ZNF143 GTRD no Epithelial (MCF-7) 21579600
chr12 122449181 122450019 ZNF143 GTRD no Epithelial (MCF-7) 21579601
chr12 122449191 122449948 ZNF143 GTRD no Epithelial (MCF-7) 21579602
chr12 122449193 122450201 ZNF143 GTRD no Epithelial (MCF-7) 21579603
chr12 122449198 122449988 ZNF143 GTRD no Epithelial (MCF-7) 21579604
chr12 122449199 122450097 ZNF143 GTRD no Epithelial (MCF-7) 21579605
chr12 122449200 122449899 ZNF143 GTRD no Epithelial (MCF-7) 21579606
chr12 122449200 122450028 P63 GTRD no Skin (Keratinocyte) 21579607
chr12 122449223 122449928 ZNF143 GTRD no Epithelial (MCF-7) 21579608
chr12 122449226 122450115 ZNF143 GTRD no Epithelial (MCF-7) 21579609
chr12 122449240 122449752 ZNF143 GTRD no Epithelial (MCF-7) 21579610
chr12 122449240 122450006 P63 GTRD no Skin (Keratinocyte) 21579611
chr12 122449243 122449938 ZNF143 GTRD no Epithelial (MCF-7) 21579612
chr12 122449257 122449262 H4TF1 TRANSFAC yes 124257960
Genes associated with rs78143226[chr12:122449257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More