EnhancerDB
  1. Home
  2. SNP
  3. rs78143990[chr1:43475295]
Enhancers that have rs78143990[chr1:43475295]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 43475221 43475543 vista1396
VISTA
Transcript factors that have rs78143990[chr1:43475295]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43475010 43475370 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803015
chr1 43475291 43475295 H1TF2 TRANSFAC yes 28477617
chr1 43475291 43475295 NFE TRANSFAC yes 28477618
chr1 43475291 43475295 SRF TRANSFAC yes 28477619
chr1 43475291 43475295 H1TF2 TRANSFAC yes 118282425
chr1 43475291 43475295 NFE TRANSFAC yes 118282426
chr1 43475291 43475295 SRF TRANSFAC yes 118282427
Genes associated with rs78143990[chr1:43475295], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More