EnhancerDB
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  3. rs78178088[chr1:56096919]
Enhancers that have rs78178088[chr1:56096919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56095225 56109155 enh26723
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Kidney
Transcript factors that have rs78178088[chr1:56096919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56095134 56097045 TEF1 GTRD no Bone (Osteoblast) 21325392
chr1 56096906 56096920 POU4F1 JASPAR yes 29056386
chr1 56096907 56096921 POU4F1 JASPAR yes 29056387
chr1 56096907 56096923 POU4F2 JASPAR yes 29056388
chr1 56096907 56096923 POU4F3 JASPAR yes 29056389
chr1 56096908 56096919 PHOX2A JASPAR yes 29056390
chr1 56096908 56096924 POU4F2 JASPAR yes 29056391
chr1 56096908 56096924 POU4F3 JASPAR yes 29056392
chr1 56096909 56096919 PAX3 JASPAR yes 29056393
chr1 56096909 56096919 PAX7 JASPAR yes 29056394
chr1 56096910 56096924 POU4F1 JASPAR yes 29056395
chr1 56096911 56096921 POU6F1 JASPAR yes 29056396
chr1 56096911 56096925 RORA JASPAR yes 29056397
chr1 56096912 56096920 LMX1A JASPAR yes 29056398
chr1 56096912 56096920 LMX1B JASPAR yes 29056399
chr1 56096912 56096920 NKX6-1 JASPAR yes 29056400
chr1 56096912 56096920 NKX6-2 JASPAR yes 29056401
chr1 56096912 56096920 VAX1 JASPAR yes 29056402
chr1 56096912 56096920 VAX2 JASPAR yes 29056403
chr1 56096912 56096920 VSX1 JASPAR yes 29056404
chr1 56096912 56096920 VSX2 JASPAR yes 29056405
Genes associated with rs78178088[chr1:56096919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More