EnhancerDB
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  3. rs78194394[chr2:38619940]
Enhancers that have rs78194394[chr2:38619940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38619285 38628240 enh5423
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs78194394[chr2:38619940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38619927 38619947 RREB1 JASPAR yes 73135189
chr2 38619928 38619949 IRF1 JASPAR yes 73135191
chr2 38619932 38619944 IRF1 JASPAR yes 73135193
chr2 38619932 38619950 IRF2 JASPAR yes 73135194
chr2 38619933 38619954 IRF1 JASPAR yes 73135195
chr2 38619934 38619940 TCF4 TRANSFAC yes 73135196
chr2 38619934 38619949 FOXP1 JASPAR yes 73135197
chr2 38619935 38619950 STAT2 JASPAR yes 73135198
chr2 38619936 38619950 STAT1 JASPAR yes 73135199
chr2 38619937 38619949 IRF1 JASPAR yes 73135200
chr2 38619937 38619951 IRF7 JASPAR yes 73135201
chr2 38619939 38619945 TCF4 TRANSFAC yes 73135202
chr2 38619939 38619954 FOXP1 JASPAR yes 73135203
chr2 38619940 38619949 SRY JASPAR yes 73135204
chr2 38619940 38619951 FOXP2 JASPAR yes 73135205
Genes associated with rs78194394[chr2:38619940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More