EnhancerDB
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  3. rs78224620[chr2:238655592]
Enhancers that have rs78224620[chr2:238655592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238648865 238656355 enh34437
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78224620[chr2:238655592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238655588 238655603 TFAP2A JASPAR yes 82139912
chr2 238655588 238655603 TFAP2C JASPAR yes 82139913
chr2 238655590 238655602 TFAP2A JASPAR yes 82139914
chr2 238655590 238655602 TFAP2B JASPAR yes 82139915
chr2 238655590 238655602 TFAP2C JASPAR yes 82139916
chr2 238655590 238655605 TFAP2A JASPAR yes 82139917
chr2 238655590 238655605 TFAP2C JASPAR yes 82139918
chr2 238655591 238655602 TFAP2A JASPAR yes 82139919
chr2 238655591 238655602 TFAP2B JASPAR yes 82139920
Genes associated with rs78224620[chr2:238655592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More