EnhancerDB
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  3. rs78227290[chr6:42488578]
Enhancers that have rs78227290[chr6:42488578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42486625 42495135 enh9121
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (Karpas-422) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs78227290[chr6:42488578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42488462 42488782 JUND UCSC Txn Factor no Conserved 108540267
chr6 42488568 42488578 GSC2 JASPAR yes 101727226
chr6 42488569 42488578 PITX3 JASPAR yes 101727230
chr6 42488574 42488585 PROP1 JASPAR yes 101727231
chr6 42488575 42488581 HiNF-A TRANSFAC yes 101727232
Genes associated with rs78227290[chr6:42488578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More